Good call, don't use your house as a load bank when working on the machine, bad things can happen.
It is very hard to accurately diagnose things from an audio clip, but it does sound like the engine is fluttering somewhat, and possibly another odd noise, but sound can be deceiving when listening on the computer.
Cylinder temps can be very useful, but don't be fooled by that hot spot near cyl.3 it could simply be the fact that there is more heat as you get closer to the outlet into the muffler.
Cylinder temps taken at the underside of the exhaust ports in the head tend to be more accurate, but still you need to be cautious of temp errors caused by more airflow towards the front of the motor. And take the temp while under a heavy load, that will tell you a lot more about fuel distribution.
As LITD mentioned, if the inlet line to any of the metering pumps appears substantially further from the pushrod tube than others, that pump will be supplying more fuel to it's cylinder than the others and should show us as being a bit hotter than the other cylinders.
At first start up, do you get any smoke other than the initial puff of black at first? Any noticeable grayish smoke at all after the first 2 or 3 seconds?
Once you get a load test set up and give us some more info on smoke color, temps etc. we should be able to tell more.
Also, next time you run it under a load, try cracking the lines coming off each metering pump, one at a time and see if the motor stumbles as you crack each line.
If you crack any line and nothing changes, that cylinder is not firing correctly.