There is NO 2 PHASE ,You are confused on how electricity works. There is 1Ph and 3Ph, 1Ph 60Hz is either 120V or 240V, your MEP has a configure switch/clips for output. Place the unit into 1Ph 240v, run this to your transfer switch, don't forget the ground, 3 wires 2-hot 1 common ground and a ground rod for the MEP. Always use the ground rod, connect with a copper rope or 8Ga solid copper. Then wire from the transfer switch to your home fuse box, this will cover your well pump already on the house circuit breaker and any other loads you have.
If I were you I and I did not completely understand how the system works, I would find a spot outside of your home close to the interior mechanical room where the fuse box is and pour a concrete pad and mount the unit as back up. Then call an electrician to complete the install from there. Power can kill so if you don't understand ANYTHING get help before you hurt yourself or burn the house down.
Last Fall our lake was out of power for 3 days. I stopped by Tom's, a neighbors home to check on him, I pulled into the driveway and Carol his wife was screaming and there was smoke coming out the door and windows. Tom a 63 Yo man had both 120v lines hooked up to the house and forgot the system common ground, he hooked up 2 lines not 3 lines from the generator. This caused 2 plasma TV's, a fridge, 2 freezers, 1 bedroom clock, stereo, breathing machine, cable converter and other things plugged in to smoke and killed them all, Big insurance claim.Tom is lucky the house wires did not burn the house down. After that I installed a transfer switch for him so all he has to do when the power goes out is, start the generator, make sure its warm first then, throw the transfer switch.
I hope I made my point, If you do not completely understand power call a licensed electrician. As WM says, Thats my two centavos